Fusobacterium polymorphum strain ChDC F319

Gram-negativeRodNon-motileAnaerobic

Kingdom

Fusobacteriati

Phylum

Fusobacteriota

Class

Fusobacteriia

Order

Fusobacteriales

Family

Fusobacteriaceae

Genus

Fusobacterium

Description

Fusobacterium polymorphum strain ChDC F319 is a gram-negative, nonsporulating, anaerobic bacterium that resides in the gut of its host. This strain is classified as a chemoheterotroph, meaning it derives its energy from organic compounds. Its cellular arrangement typically occurs in pairs, and it presents a rod shape, which is characteristic of many members within the Fusobacterium genus. F. polymorphum strain ChDC F319 has a single replicon and does not exhibit mobility, despite the presence of flagella. The optimal growth temperature for this strain is 37°C, placing it within the mesophilic temperature range, which is conducive to its survival in the warm environment of the gut. The ecological role of Fusobacterium polymorphum strain ChDC F319 in the gut microbiome can be significant, as it may interact with other microbial species and contribute to the overall metabolic processes occurring in this environment. By utilizing organic compounds as an energy source, this bacterium may play a part in nutrient cycling and the maintenance of gut health. The presence of such species underscores the complexity of gut microbiota and their contributions to host wellbeing. The strain is cataloged with the accession number NZ_CP013328.1, indicating its availability for further scientific study.

Taxonomy

KingdomFusobacteriati
PhylumFusobacteriota
ClassFusobacteriia
OrderFusobacteriales
FamilyFusobacteriaceae
GenusFusobacterium
SpeciesFusobacterium polymorphum
Strainstrain ChDC F319

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Fusobacterium polymorphum strain ChDC F319
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatHost Gut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementPairs
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Fusobacterium polymorphum strain ChDC F319 chromosome.

Gene Summary

Adenine Count

874068 bp

Thymine Count

928780 bp

Guanine Count

315489 bp

Cytosine Count

350973 bp

Genome Length

2469901 bp

Protein-coding Genes

2328 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhRN93_RS10365Q8R6F5Positive2167397 - 216834135806.3
hypothetical proteinRN93_RS10370Not AvailablePositive2168343 - 216860010199.5
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdRN93_RS10375Q8R5Z8Positive2168602 - 216995751733.0
hypothetical proteinRN93_RS10380Not AvailablePositive2170210 - 21704228086.13
rna-directed dna polymeraseRN93_RS10385Not AvailablePositive2170427 - 217193559402.0
hypothetical proteinRN93_RS10390Not AvailablePositive2172056 - 21722778712.23
voc family proteinRN93_RS10395Not AvailablePositive2172854 - 217324915530.5
tetr/acrr family transcriptional regulatorRN93_RS10400P28815Positive2173261 - 217385122395.0
yiix/yebb-like n1pc/p60 family cysteine hydrolaseRN93_RS10405Not AvailablePositive2173989 - 217455822384.2
nad-dependent dna ligase ligaRN93_RS10410Q8RI94Positive2174663 - 217675379468.6

Displaying genes 2081 – 2090 of 2388 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

119 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da

Displaying 1–10 of 119 metabolites

Health Effects

No health effects information available for this bacterium.