Fusobacterium polymorphum strain ChDC F319

Gram-negativeRodNon-motileAnaerobic

Kingdom

Fusobacteriati

Phylum

Fusobacteriota

Class

Fusobacteriia

Order

Fusobacteriales

Family

Fusobacteriaceae

Genus

Fusobacterium

Description

Fusobacterium polymorphum strain ChDC F319 is a Gram-negative, rod-shaped bacterium that typically arranges itself in pairs and is characterized as a nonsporulating organism. This strain is a chemoheterotroph, deriving its energy from organic compounds, and thrives in anaerobic conditions, making it well-adapted to its habitat within the host gut. The optimal growth temperature for this strain is approximately 37.0 degrees Celsius, which aligns with the physiological temperature of many host organisms. As a member of the gut microbiota, Fusobacterium polymorphum strain ChDC F319 may play a role in the complex interactions within the gastrointestinal ecosystem, contributing to the metabolic processes that facilitate nutrient absorption and maintain gut homeostasis. The anaerobic nature of this strain suggests it may be involved in the fermentation of substrates that are otherwise indigestible by the host, potentially influencing the overall health and microbial diversity of the gut environment. Understanding the specific functions and interactions of this strain could provide insights into its contributions to host health and disease dynamics within the gut microbiome.

Taxonomy

KingdomFusobacteriati
PhylumFusobacteriota
ClassFusobacteriia
OrderFusobacteriales
FamilyFusobacteriaceae
GenusFusobacterium
SpeciesFusobacterium polymorphum
Strainstrain ChDC F319

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Fusobacterium polymorphum strain ChDC F319
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatHost Gut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementPairs
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Fusobacterium polymorphum strain ChDC F319


Gene Summary

Adenine Count

874068 bp

Thymine Count

928780 bp

Guanine Count

315489 bp

Cytosine Count

350973 bp

Genome Length

2469901 bp

Protein-coding Genes

2328 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dihydroxy-acid dehydrataseRN93_RS00005Not Available-4 - 166558705.3
duf421 domain-containing proteinRN93_RS00010Not Available-2102 - 273423399.0
duf3290 domain-containing proteinRN93_RS00015Not Available-2734 - 318617553.4
hypothetical proteinRN93_RS00020Not Available-3202 - 34359021.57
duf4291 domain-containing proteinRN93_RS00025Not Available-3493 - 405922379.7
heat repeat domain-containing proteinRN93_RS11990Not Available-4059 - 458320773.9
hypothetical proteinRN93_RS00035Not Available-4760 - 506211556.0
hypothetical proteinRN93_RS00040Not Available-5261 - 591425478.3
hypothetical proteinRN93_RS00045Not Available-5904 - 618510272.4
hypothetical proteinRN93_RS00050Not Available-6213 - 649410319.1

Displaying genes 1 – 10 of 2388 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

119 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da

Displaying 1–10 of 119 metabolites