Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE5, complete sequence.
Gene Summary
Adenine Count
3938 bp
Thymine Count
4063 bp
Guanine Count
6718 bp
Cytosine Count
6686 bp
Genome Length
21405 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traf | ATN00_RS21160 | Not Available | Negative | 214250 - 215095 | 31163.0 |
| hypothetical protein | ATN00_RS21165 | Not Available | Negative | 215088 - 215492 | 14784.0 |
| conjugal transfer protein tran | ATN00_RS21170 | Not Available | Negative | 215470 - 217341 | 67485.4 |
| type-f conjugative transfer system pilin assembly protein trbc | ATN00_RS21175 | Not Available | Negative | 217343 - 218092 | 26336.5 |
| conjugal transfer pilus assembly protein trau | ATN00_RS21180 | P18471 | Negative | 218105 - 219121 | 37012.2 |
| hypothetical protein | ATN00_RS21185 | Not Available | Negative | 219118 - 219396 | 10111.6 |
| type-f conjugative transfer system protein traw | ATN00_RS21190 | Not Available | Negative | 219396 - 220034 | 23309.1 |
| s26 family signal peptidase | ATN00_RS21195 | Not Available | Negative | 220031 - 220582 | 19757.1 |
| type-f conjugative transfer system protein trbi | ATN00_RS21200 | Not Available | Negative | 220563 - 221249 | 23341.0 |
| hypothetical protein | ATN00_RS21205 | Not Available | Negative | 221246 - 221593 | 12516.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

