Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE5, complete sequence.
Gene Summary
Adenine Count
3938 bp
Thymine Count
4063 bp
Guanine Count
6718 bp
Cytosine Count
6686 bp
Genome Length
21405 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetoacetyl-coa reductase | ATN00_RS21070 | Not Available | Positive | 189758 - 190486 | 25267.3 |
| hypothetical protein | ATN00_RS21075 | Not Available | Positive | 190593 - 191036 | 15804.4 |
| efflux transporter outer membrane subunit | ATN00_RS21080 | Q8CWA4 | Positive | 191164 - 192606 | 51859.8 |
| hlyd family secretion protein | ATN00_RS21085 | P37626 | Positive | 192603 - 193676 | 38438.1 |
| ribosome-associated atpase/putative transporter rbba | ATN00_RS21090 | P37624 | Positive | 193681 - 196428 | 100010.0 |
| abc transporter permease | ATN00_RS21095 | P0AGH1 | Positive | 196430 - 197557 | 41011.8 |
| simpl domain-containing protein | ATN00_RS21100 | Not Available | Negative | 197945 - 198268 | 11359.8 |
| is110 family transposase | ATN00_RS21105 | Not Available | Negative | 198568 - 199683 | 41895.7 |
| tn3 family transposase | ATN00_RS21110 | P06695 | Negative | 199568 - 202729 | 116491.0 |
| recombinase family protein | ATN00_RS21115 | P03015 | Positive | 202863 - 203504 | 23314.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

