Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE5, complete sequence.
Gene Summary
Adenine Count
3938 bp
Thymine Count
4063 bp
Guanine Count
6718 bp
Cytosine Count
6686 bp
Genome Length
21405 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic heavy metal sensor | ATN00_RS20920 | Not Available | Positive | 160490 - 160930 | 16263.8 |
| rna polymerase sigma factor | ATN00_RS20925 | P37978 | Positive | 160927 - 161493 | 20832.9 |
| copper resistance system multicopper oxidase | ATN00_RS20930 | Not Available | Positive | 161561 - 163513 | 70402.4 |
| copper resistance protein b | ATN00_RS20935 | Not Available | Positive | 163510 - 164697 | 42706.5 |
| duf305 domain-containing protein | ATN00_RS20940 | Not Available | Positive | 164788 - 165261 | 17672.3 |
| pas domain-containing sensor histidine kinase | ATN00_RS20945 | P26489 | Positive | 165320 - 166855 | 56395.1 |
| response regulator transcription factor | ATN00_RS20950 | P26487 | Positive | 166845 - 167465 | 22291.0 |
| response regulator | ATN00_RS20955 | Not Available | Positive | 167549 - 167953 | 14926.9 |
| mfs transporter | ATN00_RS20960 | Not Available | Negative | 168135 - 169370 | 41785.0 |
| copper resistance protein b | ATN00_RS20965 | P12375 | Negative | 169364 - 170350 | 35688.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

