Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE5, complete sequence.
Gene Summary
Adenine Count
3938 bp
Thymine Count
4063 bp
Guanine Count
6718 bp
Cytosine Count
6686 bp
Genome Length
21405 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase rna specificity domain-containing protein | ATN00_RS20875 | Q5SLP1 | Positive | 150502 - 151950 | 52716.1 |
| thymidine phosphorylase family protein | ATN00_RS20880 | Q1GQ92 | Positive | 151947 - 153485 | 52984.8 |
| ribose-phosphate pyrophosphokinase | ATN00_RS20885 | Q58761 | Positive | 153482 - 154390 | 33138.7 |
| response regulator transcription factor | ATN00_RS20890 | P10958 | Positive | 154953 - 155588 | 22804.4 |
| cu(i)-responsive transcriptional regulator | ATN00_RS20895 | Q9HV30 | Negative | 155615 - 156013 | 14791.7 |
| heavy metal translocating p-type atpase | ATN00_RS20900 | Q9ZHC7 | Negative | 156010 - 158367 | 82107.8 |
| serine hydrolase domain-containing protein | ATN00_RS24315 | Not Available | Negative | 158473 - 158725 | 10084.1 |
| copper homeostasis membrane protein copd | ATN00_RS20905 | P12377 | Negative | 158762 - 159706 | 32620.0 |
| copper homeostasis periplasmic binding protein copc | ATN00_RS20910 | P12376 | Negative | 159711 - 160088 | 13081.1 |
| hypothetical protein | ATN00_RS20915 | Not Available | Positive | 160221 - 160490 | 9230.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

