Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE5, complete sequence.
Gene Summary
Adenine Count
3938 bp
Thymine Count
4063 bp
Guanine Count
6718 bp
Cytosine Count
6686 bp
Genome Length
21405 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS24080 | Not Available | Positive | 135081 - 135272 | 7085.42 |
| serine hydrolase domain-containing protein | ATN00_RS24085 | Not Available | Negative | 135405 - 135848 | 16125.6 |
| type iv secretory system conjugative dna transfer family protein | ATN00_RS20780 | P18594 | Negative | 135838 - 137802 | 70594.7 |
| p-type dna transfer atpase virb11 | ATN00_RS20785 | Q9RNC7 | Negative | 137786 - 138790 | 36442.7 |
| type iv secretion system protein virb10 | ATN00_RS20790 | Q6G2B2 | Negative | 138794 - 140011 | 41984.5 |
| p-type conjugative transfer protein virb9 | ATN00_RS20795 | Q6FYW2 | Negative | 140015 - 140872 | 31383.2 |
| virb8 family protein | ATN00_RS20800 | Q6G2B4 | Negative | 140869 - 141567 | 26316.0 |
| serine hydrolase domain-containing protein | ATN00_RS24310 | Not Available | Negative | 141908 - 142135 | 7777.48 |
| is3 family transposase | ATN00_RS20815 | P37007 | Positive | 142245 - 143608 | 52543.8 |
| virb3 family type iv secretion system protein | ATN00_RS23515 | Not Available | Negative | 143644 - 143862 | 7466.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

