Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE5, complete sequence.
Gene Summary
Adenine Count
3938 bp
Thymine Count
4063 bp
Guanine Count
6718 bp
Cytosine Count
6686 bp
Genome Length
21405 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase/mobilization nuclease domain-containing protein | ATN00_RS20730 | Not Available | Positive | 118896 - 120017 | 40958.9 |
| duf6088 family protein | ATN00_RS20735 | Not Available | Positive | 120186 - 120794 | 21645.0 |
| nucleotidyl transferase abieii/abigii toxin family protein | ATN00_RS20740 | Not Available | Positive | 120787 - 121836 | 38785.5 |
| hypothetical protein | ATN00_RS20745 | Not Available | Positive | 122100 - 122303 | 7919.43 |
| hypothetical protein | ATN00_RS23800 | Not Available | Negative | 122352 - 122510 | 5723.13 |
| uvrd-helicase domain-containing protein | ATN00_RS20750 | Not Available | Negative | 122635 - 124407 | 65303.1 |
| atp-dependent endonuclease | ATN00_RS20755 | P0DW47 | Negative | 124400 - 126466 | 76365.6 |
| yhan family protein | ATN00_RS20760 | Not Available | Negative | 126626 - 130066 | 124803.0 |
| dna repair exonuclease | ATN00_RS20765 | O07522 | Negative | 130069 - 131322 | 44486.7 |
| dna methyltransferase | ATN00_RS20770 | Not Available | Negative | 131414 - 134884 | 129179.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

