Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE5, complete sequence.
Gene Summary
Adenine Count
3938 bp
Thymine Count
4063 bp
Guanine Count
6718 bp
Cytosine Count
6686 bp
Genome Length
21405 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| parb/repb/spo0j family partition protein | ATN00_RS20585 | Not Available | Negative | 90553 - 91566 | 37531.1 |
| aaa family atpase | ATN00_RS20590 | P05682 | Negative | 91614 - 92816 | 43937.7 |
| replication initiation protein | ATN00_RS20595 | Not Available | Negative | 93011 - 94099 | 40412.3 |
| single-stranded dna-binding protein | ATN00_RS20600 | Not Available | Positive | 94765 - 95091 | 12311.5 |
| toprim domain-containing protein | ATN00_RS20605 | Not Available | Positive | 95154 - 96020 | 31191.1 |
| strawberry notch family protein | ATN00_RS20610 | Q5BJL5 | Positive | 96087 - 100286 | 152925.0 |
| parb/repb/spo0j family partition protein | ATN00_RS20615 | Not Available | Positive | 100398 - 102410 | 73017.3 |
| serine hydrolase domain-containing protein | ATN00_RS20620 | Not Available | Positive | 102503 - 103126 | 23738.0 |
| tyrosine-type recombinase/integrase | ATN00_RS20625 | P55634 | Positive | 103243 - 104454 | 44564.9 |
| tyrosine-type recombinase/integrase | ATN00_RS20630 | B6IPE2 | Positive | 104451 - 105392 | 34959.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

