Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE5, complete sequence.
Gene Summary
Adenine Count
3938 bp
Thymine Count
4063 bp
Guanine Count
6718 bp
Cytosine Count
6686 bp
Genome Length
21405 bp
Protein-coding Genes
18 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS20480 | Not Available | Negative | 70746 - 71120 | 13522.1 |
| para family protein | ATN00_RS20485 | P07175 | Negative | 71117 - 71788 | 23843.5 |
| hypothetical protein | ATN00_RS20490 | Not Available | Negative | 72185 - 72751 | 21610.7 |
| 2'-5' rna ligase family protein | ATN00_RS20495 | Not Available | Negative | 72961 - 73518 | 20605.7 |
| restriction endonuclease | ATN00_RS20505 | Not Available | Positive | 73849 - 74334 | 17652.8 |
| helix-turn-helix domain-containing protein | ATN00_RS20510 | Not Available | Negative | 74467 - 75402 | 32942.4 |
| tyrosine-type recombinase/integrase | ATN00_RS20515 | Not Available | Positive | 75556 - 76587 | 36931.4 |
| hypothetical protein | ATN00_RS20520 | Not Available | Negative | 76768 - 77217 | 17206.4 |
| hypothetical protein | ATN00_RS20525 | Not Available | Negative | 77214 - 77531 | 11714.1 |
| tn3 family transposase | ATN00_RS20530 | Q06238 | Positive | 77673 - 80582 | 108835.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

