Collimonas arenae strain Ter282

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas arenae strain Ter282 is characterized by having a single replicon, which contributes to its genomic stability and functional capacity. The strain is cataloged under the accession number NZ_CP013235.1, indicating its presence in genomic databases, which facilitates research and comparison with other microbial strains. Collimonas arenae belongs to a genus known for its unique ecological role in soil ecosystems, particularly in decomposing organic matter and interacting with fungi. This strain is likely to exhibit similar ecological traits, contributing to nutrient cycling and soil health. The ability of Collimonas species to thrive in diverse environments suggests that strain Ter282 may possess specialized adaptations that enhance its survival and functionality in soil habitats. Understanding the genomic features of Collimonas arenae strain Ter282 can provide insights into its metabolic pathways and ecological interactions. The single replicon may indicate a streamlined genetic organization, which could be advantageous for efficient resource utilization in its natural habitat. Overall, the study of this strain contributes to the broader understanding of microbial diversity and its impact on soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas arenae
Strainstrain Ter282

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas arenae strain Ter282 chromosome, complete genome.

Gene Summary

Adenine Count

1017359 bp

Thymine Count

1018207 bp

Guanine Count

1333384 bp

Cytosine Count

1340427 bp

Genome Length

4709377 bp

Protein-coding Genes

4235 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide heptosyltransferase iCAter282_RS03730Not AvailablePositive800409 - 80139536270.9
selenocysteine-specific translation elongation factorCAter282_RS03740Not AvailableNegative801665 - 80360570534.0
l-seryl-trna(sec) selenium transferaseCAter282_RS03745Not AvailableNegative803602 - 80505952096.4
formate dehydrogenase accessory protein fdheCAter282_RS03750Not AvailableNegative805060 - 80600435056.1
formate dehydrogenase subunit gammaCAter282_RS03755Not AvailableNegative806140 - 80678124497.6
formate dehydrogenase subunit betaCAter282_RS03760Not AvailableNegative806778 - 80774034745.5
formate dehydrogenase-n subunit alphaCAter282_RS03765Not AvailableNegative807749 - 810817113181.0
kdo hydroxylase family proteinCAter282_RS03775Not AvailablePositive811048 - 81192933356.7
lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferaseCAter282_RS03780Not AvailablePositive811968 - 81325747237.7
ydcf family proteinCAter282_RS03785Not AvailablePositive813272 - 81403027081.4

Displaying genes 741 – 750 of 4235 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.