Collimonas arenae strain Ter282

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas arenae strain Ter282 is characterized by having a single replicon, which contributes to its genomic stability and functional capacity. The strain is cataloged under the accession number NZ_CP013235.1, indicating its presence in genomic databases, which facilitates research and comparison with other microbial strains. Collimonas arenae belongs to a genus known for its unique ecological role in soil ecosystems, particularly in decomposing organic matter and interacting with fungi. This strain is likely to exhibit similar ecological traits, contributing to nutrient cycling and soil health. The ability of Collimonas species to thrive in diverse environments suggests that strain Ter282 may possess specialized adaptations that enhance its survival and functionality in soil habitats. Understanding the genomic features of Collimonas arenae strain Ter282 can provide insights into its metabolic pathways and ecological interactions. The single replicon may indicate a streamlined genetic organization, which could be advantageous for efficient resource utilization in its natural habitat. Overall, the study of this strain contributes to the broader understanding of microbial diversity and its impact on soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas arenae
Strainstrain Ter282

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas arenae strain Ter282 chromosome, complete genome.

Gene Summary

Adenine Count

1017359 bp

Thymine Count

1018207 bp

Guanine Count

1333384 bp

Cytosine Count

1340427 bp

Genome Length

4709377 bp

Protein-coding Genes

4235 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-dependent succinate-semialdehyde dehydrogenaseCAter282_RS20910Not AvailableNegative4624015 - 462546951487.9
abc transporter permeaseCAter282_RS20915Not AvailableNegative4625553 - 462638629864.5
abc transporter permeaseCAter282_RS20920Not AvailableNegative4626391 - 462764745866.7
abc transporter substrate-binding proteinCAter282_RS20925Not AvailableNegative4627783 - 462882337410.8
abc transporter atp-binding proteinCAter282_RS20930Not AvailableNegative4629002 - 463020143964.4
4-aminobutyrate--2-oxoglutarate transaminaseCAter282_RS20935Not AvailableNegative4630387 - 463172446930.8
plp-dependent aminotransferase family proteinCAter282_RS20940Not AvailablePositive4631897 - 463343856782.7
transporter substrate-binding domain-containing proteinCAter282_RS20945Not AvailablePositive4633499 - 463427228555.3
sgnh/gdsl hydrolase family proteinCAter282_RS20950Not AvailableNegative4634276 - 463509129430.3
ppk2 family polyphosphate kinaseCAter282_RS20955Not AvailableNegative4635215 - 463602130564.7

Displaying genes 4161 – 4170 of 4235 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.