Collimonas arenae strain Ter282

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas arenae strain Ter282 is characterized by having a single replicon, which contributes to its genomic stability and functional capacity. The strain is cataloged under the accession number NZ_CP013235.1, indicating its presence in genomic databases, which facilitates research and comparison with other microbial strains. Collimonas arenae belongs to a genus known for its unique ecological role in soil ecosystems, particularly in decomposing organic matter and interacting with fungi. This strain is likely to exhibit similar ecological traits, contributing to nutrient cycling and soil health. The ability of Collimonas species to thrive in diverse environments suggests that strain Ter282 may possess specialized adaptations that enhance its survival and functionality in soil habitats. Understanding the genomic features of Collimonas arenae strain Ter282 can provide insights into its metabolic pathways and ecological interactions. The single replicon may indicate a streamlined genetic organization, which could be advantageous for efficient resource utilization in its natural habitat. Overall, the study of this strain contributes to the broader understanding of microbial diversity and its impact on soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas arenae
Strainstrain Ter282

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas arenae strain Ter282 chromosome, complete genome.

Gene Summary

Adenine Count

1017359 bp

Thymine Count

1018207 bp

Guanine Count

1333384 bp

Cytosine Count

1340427 bp

Genome Length

4709377 bp

Protein-coding Genes

4235 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pepsy domain-containing proteinCAter282_RS01810Not AvailablePositive380092 - 38123441590.0
nad(p)/fad-dependent oxidoreductaseCAter282_RS01815Not AvailableNegative381259 - 38251245954.7
phytanoyl-coa dioxygenase family proteinCAter282_RS01820Not AvailableNegative382538 - 38331728642.7
excinuclease abc subunit uvraCAter282_RS01825Not AvailableNegative383385 - 386258105945.0
tetratricopeptide repeat proteinCAter282_RS01830Not AvailableNegative386472 - 38851776346.7
mfs transporterCAter282_RS01835Not AvailablePositive388936 - 39013541989.0
enoyl-coa hydratase/isomerase family proteinCAter282_RS01840Not AvailablePositive390727 - 3909878905.79
tote conflict system archaeo-eukaryotic primase domain-containing proteinCAter282_RS01845Not AvailableNegative391057 - 39344789116.1
hypothetical proteinCAter282_RS01855Not AvailablePositive394298 - 39461812200.7
nacht domain-containing ntpaseCAter282_RS01860Not AvailablePositive395407 - 399858168031.0

Displaying genes 361 – 370 of 4235 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.