Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas pratensis |
| Strain | strain Ter91 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1181550 bp
Thymine Count
1182785 bp
Guanine Count
1682193 bp
Cytosine Count
1683497 bp
Genome Length
5730025 bp
Protein-coding Genes
5076 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase subunit beta | CPter91_RS03305 | Not Available | Negative | 727228 - 727920 | 26119.1 |
| iclr family transcriptional regulator c-terminal domain-containing protein | CPter91_RS03310 | Not Available | Positive | 728175 - 729011 | 30371.1 |
| iclr family transcriptional regulator c-terminal domain-containing protein | CPter91_RS03315 | Not Available | Negative | 729061 - 729843 | 28603.7 |
| 4-hydroxyphenylpyruvate dioxygenase | CPter91_RS03320 | Not Available | Positive | 729974 - 730858 | 32505.9 |
| shikimate dehydrogenase | CPter91_RS03325 | Not Available | Positive | 730851 - 731699 | 30155.8 |
| sugar phosphate isomerase/epimerase | CPter91_RS03330 | Not Available | Positive | 731696 - 732583 | 32429.0 |
| type ii 3-dehydroquinate dehydratase | CPter91_RS03335 | Not Available | Positive | 732661 - 733134 | 16502.7 |
| porin | CPter91_RS03340 | Not Available | Positive | 733240 - 734361 | 39838.5 |
| mfs transporter | CPter91_RS03345 | Not Available | Positive | 734444 - 735790 | 47728.9 |
| shikimate transporter | CPter91_RS03350 | Not Available | Positive | 735903 - 737264 | 48762.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
