Collimonas pratensis strain Ter91

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas pratensis strain Ter91 is characterized by having a single replicon, which simplifies its genomic structure and may influence its adaptability in various environments. The strain is cataloged under the accession number NZ_CP013234.1, which allows for its identification and provides access to its genomic data. This strain is part of the Collimonas genus, known for its distinct ecological role as a saprophytic bacterium, particularly in soil environments. Collimonas species are recognized for their ability to degrade organic matter and form symbiotic relationships with fungi, contributing to nutrient cycling and soil health. The single replicon observed in strain Ter91 may enhance its efficiency in these ecological interactions, as it could streamline the regulation of genes involved in metabolic processes and environmental responses. In summary, the genomic structure of Collimonas pratensis strain Ter91, with its single replicon, reflects its specialized adaptations to its ecological niche. By facilitating efficient metabolic and ecological functions, this strain likely plays a critical role in soil ecosystems, supporting both organic matter decomposition and interactions with other soil microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas pratensis
Strainstrain Ter91

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas pratensis strain Ter91 chromosome, complete genome.

Gene Summary

Adenine Count

1181550 bp

Thymine Count

1182785 bp

Guanine Count

1682193 bp

Cytosine Count

1683497 bp

Genome Length

5730025 bp

Protein-coding Genes

5076 genes

Non-Coding Genes

136 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtpase obgeCPter91_RS22290Not AvailableNegative5016805 - 501791440510.6
50s ribosomal protein l27CPter91_RS22295Not AvailableNegative5018188 - 50184458979.85
50s ribosomal protein l21CPter91_RS22300Not AvailableNegative5018484 - 501879511414.0
grx4 family monothiol glutaredoxinCPter91_RS22305Not AvailablePositive5019099 - 501941011340.6
ubix family flavin prenyltransferaseCPter91_RS22310Not AvailablePositive5019440 - 502002121129.1
m61 family metallopeptidaseCPter91_RS22315Not AvailableNegative5020065 - 502191567792.2
duf3429 domain-containing proteinCPter91_RS22320Not AvailableNegative5021920 - 502237816759.9
ntp transferase domain-containing proteinCPter91_RS22325Not AvailableNegative5022517 - 502311620912.2
dsbc family proteinCPter91_RS22330Not AvailableNegative5023153 - 502387526209.6
ubih/ubif family hydroxylaseCPter91_RS22335Not AvailableNegative5023896 - 502509842603.5

Displaying genes 4561 – 4570 of 5212 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.