Collimonas pratensis strain Ter91

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas pratensis strain Ter91 is characterized by having a single replicon, which simplifies its genomic structure and may influence its adaptability in various environments. The strain is cataloged under the accession number NZ_CP013234.1, which allows for its identification and provides access to its genomic data. This strain is part of the Collimonas genus, known for its distinct ecological role as a saprophytic bacterium, particularly in soil environments. Collimonas species are recognized for their ability to degrade organic matter and form symbiotic relationships with fungi, contributing to nutrient cycling and soil health. The single replicon observed in strain Ter91 may enhance its efficiency in these ecological interactions, as it could streamline the regulation of genes involved in metabolic processes and environmental responses. In summary, the genomic structure of Collimonas pratensis strain Ter91, with its single replicon, reflects its specialized adaptations to its ecological niche. By facilitating efficient metabolic and ecological functions, this strain likely plays a critical role in soil ecosystems, supporting both organic matter decomposition and interactions with other soil microorganisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas pratensis
Strainstrain Ter91

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas pratensis strain Ter91


Gene Summary

Adenine Count

1181550 bp

Thymine Count

1182785 bp

Guanine Count

1682193 bp

Cytosine Count

1683497 bp

Genome Length

5730025 bp

Protein-coding Genes

5076 genes

Non-Coding Genes

136 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporterCPter91_RS01345Not AvailablePositive292021 - 29323542634.6
phytanoyl-coa dioxygenase family proteinCPter91_RS01350Not AvailablePositive293271 - 29405030249.6
cupin domain-containing proteinCPter91_RS01355Not AvailablePositive294028 - 29439613488.2
class i trna ligase family proteinCPter91_RS01360Not AvailablePositive294398 - 29599358806.0
plp-dependent aminotransferase family proteinCPter91_RS01365Not AvailablePositive296014 - 29719842537.1
phosphate abc transporter substrate-binding protein pstsCPter91_RS01370Not AvailableNegative297231 - 29828638076.5
autotransporter-associated beta strand repeat-containing proteinCPter91_RS01375Not AvailableNegative298575 - 306719253573.0
gaf domain-containing proteinCPter91_RS01385Not AvailablePositive307340 - 30785218407.7
type vi secretion system vgr family proteinCPter91_RS01390Not AvailablePositive308253 - 31076393406.7
duf4123 domain-containing proteinCPter91_RS01395Not AvailablePositive310763 - 31157230405.7

Displaying genes 371 – 380 of 5212 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.