Collimonas fungivorans strain Ter6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas fungivorans strain Ter6 is a notable bacterium characterized by a single replicon, which is significant for its genetic stability and adaptability. The strain is cataloged under the accession number NZ_CP013232.1, indicating its entry into the genomic databases for further study and reference. This strain is particularly interesting due to its ecological role, as it is known to interact with fungi in the environment. Collimonas species, including Ter6, are often associated with soil ecosystems, where they contribute to nutrient cycling and play a role in the decomposition of organic matter. Their ability to thrive in nutrient-poor environments allows them to establish symbiotic relationships with fungi, which can enhance their survival and proliferation. The ecological implications of Collimonas fungivorans strain Ter6 highlight its potential contributions to soil health and sustainability. By facilitating the breakdown of fungal biomass, this bacterium may help in the recycling of nutrients within the ecosystem, thus supporting plant growth and promoting biodiversity. The interactions between Collimonas and fungi may also influence the dynamics of soil microbial communities, further underscoring the importance of this bacterium in ecological research and potential applications in agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas fungivorans
Strainstrain Ter6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas fungivorans strain Ter6 chromosome, complete genome.

Gene Summary

Adenine Count

1149766 bp

Thymine Count

1146706 bp

Guanine Count

1653311 bp

Cytosine Count

1649946 bp

Genome Length

5599729 bp

Protein-coding Genes

4995 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase factor sigma-54CFter6_RS03225Not AvailableNegative763583 - 76506454916.6
lps export abc transporter atp-binding proteinCFter6_RS03230Not AvailableNegative765182 - 76595528125.1
lipopolysaccharide transport periplasmic protein lptaCFter6_RS03235Not AvailableNegative765952 - 76649419993.7
lps export abc transporter periplasmic protein lptcCFter6_RS03240Not AvailableNegative766546 - 76713922667.4
had family hydrolaseCFter6_RS03245Not AvailableNegative767136 - 76772320528.5
sis domain-containing proteinCFter6_RS03250Not AvailableNegative767723 - 76875436284.1
cation:proton antiporterCFter6_RS03255Not AvailablePositive768919 - 77094372726.3
pepsy domain-containing proteinCFter6_RS03260Not AvailablePositive771019 - 77217942114.9
nad(p)/fad-dependent oxidoreductaseCFter6_RS03265Not AvailableNegative772191 - 77341144256.6
phytanoyl-coa dioxygenase family proteinCFter6_RS03270Not AvailableNegative773435 - 77421428448.4

Displaying genes 671 – 680 of 5061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.