Collimonas fungivorans strain Ter6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas fungivorans strain Ter6 is a notable bacterium characterized by a single replicon, which is significant for its genetic stability and adaptability. The strain is cataloged under the accession number NZ_CP013232.1, indicating its entry into the genomic databases for further study and reference. This strain is particularly interesting due to its ecological role, as it is known to interact with fungi in the environment. Collimonas species, including Ter6, are often associated with soil ecosystems, where they contribute to nutrient cycling and play a role in the decomposition of organic matter. Their ability to thrive in nutrient-poor environments allows them to establish symbiotic relationships with fungi, which can enhance their survival and proliferation. The ecological implications of Collimonas fungivorans strain Ter6 highlight its potential contributions to soil health and sustainability. By facilitating the breakdown of fungal biomass, this bacterium may help in the recycling of nutrients within the ecosystem, thus supporting plant growth and promoting biodiversity. The interactions between Collimonas and fungi may also influence the dynamics of soil microbial communities, further underscoring the importance of this bacterium in ecological research and potential applications in agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas fungivorans
Strainstrain Ter6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas fungivorans strain Ter6 chromosome, complete genome.

Gene Summary

Adenine Count

1149766 bp

Thymine Count

1146706 bp

Guanine Count

1653311 bp

Cytosine Count

1649946 bp

Genome Length

5599729 bp

Protein-coding Genes

4995 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
quaternary ammonium compound efflux smr transporter sugeCFter6_RS18275Not AvailableNegative4206148 - 420646810943.9
sodium:calcium antiporterCFter6_RS18280Not AvailableNegative4206572 - 420757635950.2
lipid a hydroxylase lpxoCFter6_RS18285Not AvailablePositive4208040 - 420894234590.9
purine nucleoside permeaseCFter6_RS18290Not AvailablePositive4209088 - 421015238561.5
type ii toxin-antitoxin system hicb family antitoxinCFter6_RS18295Not AvailableNegative4210235 - 421065415505.9
type ii toxin-antitoxin system hica family toxinCFter6_RS18300Not AvailableNegative4210755 - 42109858567.42
type ii toxin-antitoxin system hica family toxinCFter6_RS18305Not AvailablePositive4211318 - 42115006549.04
type ii toxin-antitoxin system hicb family antitoxinCFter6_RS18310Not AvailablePositive4211508 - 421189114136.9
type vi secretion system tube protein hcpCFter6_RS18315Not AvailablePositive4212125 - 421261617817.1
fumarylacetoacetaseCFter6_RS18320Not AvailableNegative4212681 - 421394945737.4

Displaying genes 3761 – 3770 of 5061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.