Collimonas fungivorans strain Ter6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas fungivorans strain Ter6 is a notable bacterium characterized by a single replicon, which is significant for its genetic stability and adaptability. The strain is cataloged under the accession number NZ_CP013232.1, indicating its entry into the genomic databases for further study and reference. This strain is particularly interesting due to its ecological role, as it is known to interact with fungi in the environment. Collimonas species, including Ter6, are often associated with soil ecosystems, where they contribute to nutrient cycling and play a role in the decomposition of organic matter. Their ability to thrive in nutrient-poor environments allows them to establish symbiotic relationships with fungi, which can enhance their survival and proliferation. The ecological implications of Collimonas fungivorans strain Ter6 highlight its potential contributions to soil health and sustainability. By facilitating the breakdown of fungal biomass, this bacterium may help in the recycling of nutrients within the ecosystem, thus supporting plant growth and promoting biodiversity. The interactions between Collimonas and fungi may also influence the dynamics of soil microbial communities, further underscoring the importance of this bacterium in ecological research and potential applications in agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas fungivorans
Strainstrain Ter6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas fungivorans strain Ter6 chromosome, complete genome.

Gene Summary

Adenine Count

1149766 bp

Thymine Count

1146706 bp

Guanine Count

1653311 bp

Cytosine Count

1649946 bp

Genome Length

5599729 bp

Protein-coding Genes

4995 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iclr family transcriptional regulator c-terminal domain-containing proteinCFter6_RS11825Not AvailableNegative2729949 - 273073128718.0
4-hydroxyphenylpyruvate dioxygenaseCFter6_RS11830Not AvailablePositive2730863 - 273176233102.5
shikimate dehydrogenaseCFter6_RS11835Not AvailablePositive2731755 - 273260030114.8
sugar phosphate isomerase/epimeraseCFter6_RS11840Not AvailablePositive2732597 - 273348432417.0
porinCFter6_RS11845Not AvailablePositive2733735 - 273485640113.8
mfs transporterCFter6_RS11850Not AvailablePositive2734937 - 273630148337.6
shikimate transporterCFter6_RS11855Not AvailablePositive2736332 - 273768748139.5
dna alkylation repair proteinCFter6_RS11860Not AvailableNegative2737712 - 273881841084.7
sdr family oxidoreductaseCFter6_RS11865Not AvailableNegative2738920 - 273970828064.7
tetr/acrr family transcriptional regulatorCFter6_RS11870Not AvailablePositive2739832 - 274038319948.7

Displaying genes 2441 – 2450 of 5061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.