Collimonas fungivorans strain Ter6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas fungivorans strain Ter6 is a notable bacterium characterized by a single replicon, which is significant for its genetic stability and adaptability. The strain is cataloged under the accession number NZ_CP013232.1, indicating its entry into the genomic databases for further study and reference. This strain is particularly interesting due to its ecological role, as it is known to interact with fungi in the environment. Collimonas species, including Ter6, are often associated with soil ecosystems, where they contribute to nutrient cycling and play a role in the decomposition of organic matter. Their ability to thrive in nutrient-poor environments allows them to establish symbiotic relationships with fungi, which can enhance their survival and proliferation. The ecological implications of Collimonas fungivorans strain Ter6 highlight its potential contributions to soil health and sustainability. By facilitating the breakdown of fungal biomass, this bacterium may help in the recycling of nutrients within the ecosystem, thus supporting plant growth and promoting biodiversity. The interactions between Collimonas and fungi may also influence the dynamics of soil microbial communities, further underscoring the importance of this bacterium in ecological research and potential applications in agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas fungivorans
Strainstrain Ter6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas fungivorans strain Ter6 chromosome, complete genome.

Gene Summary

Adenine Count

1149766 bp

Thymine Count

1146706 bp

Guanine Count

1653311 bp

Cytosine Count

1649946 bp

Genome Length

5599729 bp

Protein-coding Genes

4995 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
basic amino acid abc transporter substrate-binding proteinCFter6_RS05420Not AvailableNegative1257521 - 125831528568.2
basic amino acid abc transporter substrate-binding proteinCFter6_RS05425Not AvailableNegative1258342 - 125913328513.1
basic amino acid abc transporter substrate-binding proteinCFter6_RS05430Not AvailableNegative1259149 - 125994028531.0
substrate-binding domain-containing proteinCFter6_RS05435Not AvailableNegative1260138 - 126121439102.0
ofa family mfs transporterCFter6_RS05440Not AvailablePositive1261383 - 126302058694.0
formate dehydrogenase subunit gammaCFter6_RS05445Not AvailablePositive1263200 - 126371518303.9
nadh-quinone oxidoreductase subunit nuofCFter6_RS05450Not AvailablePositive1263712 - 126525954422.8
formate dehydrogenase subunit alphaCFter6_RS05455Not AvailablePositive1265311 - 1268169104256.0
formate dehydrogenase accessory sulfurtransferase fdhdCFter6_RS05460Not AvailablePositive1268187 - 126900229118.9
formate dehydrogenase subunit deltaCFter6_RS05465Not AvailablePositive1269024 - 12692488506.4

Displaying genes 1121 – 1130 of 5061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.