Collimonas fungivorans strain Ter6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Collimonas

Description

Collimonas fungivorans strain Ter6 is a notable bacterium characterized by a single replicon, which is significant for its genetic stability and adaptability. The strain is cataloged under the accession number NZ_CP013232.1, indicating its entry into the genomic databases for further study and reference. This strain is particularly interesting due to its ecological role, as it is known to interact with fungi in the environment. Collimonas species, including Ter6, are often associated with soil ecosystems, where they contribute to nutrient cycling and play a role in the decomposition of organic matter. Their ability to thrive in nutrient-poor environments allows them to establish symbiotic relationships with fungi, which can enhance their survival and proliferation. The ecological implications of Collimonas fungivorans strain Ter6 highlight its potential contributions to soil health and sustainability. By facilitating the breakdown of fungal biomass, this bacterium may help in the recycling of nutrients within the ecosystem, thus supporting plant growth and promoting biodiversity. The interactions between Collimonas and fungi may also influence the dynamics of soil microbial communities, further underscoring the importance of this bacterium in ecological research and potential applications in agriculture and environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusCollimonas
SpeciesCollimonas fungivorans
Strainstrain Ter6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Collimonas fungivorans strain Ter6 chromosome, complete genome.

Gene Summary

Adenine Count

1149766 bp

Thymine Count

1146706 bp

Guanine Count

1653311 bp

Cytosine Count

1649946 bp

Genome Length

5599729 bp

Protein-coding Genes

4995 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCFter6_RS04885Not AvailableNegative1127093 - 112773723421.0
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseCFter6_RS04890Not AvailablePositive1127912 - 112932450569.7
yqia/ycfp family alpha/beta fold hydrolaseCFter6_RS04895Not AvailablePositive1129321 - 112993522280.6
chorismate lyaseCFter6_RS04900Not AvailablePositive1129935 - 113062426313.5
ribonuclease catalytic domain-containing proteinCFter6_RS04905Not AvailablePositive1130635 - 113273476732.7
tonb c-terminal domain-containing proteinCFter6_RS04910Not AvailablePositive1132843 - 113374233219.8
shikimate dehydrogenaseCFter6_RS04915Not AvailablePositive1133751 - 113457528767.5
monofunctional biosynthetic peptidoglycan transglycosylaseCFter6_RS04920Not AvailablePositive1134611 - 113530626392.0
magnesium/cobalt transporter coraCFter6_RS04925Not AvailablePositive1135407 - 113637236847.1
glutamate-1-semialdehyde 2,1-aminomutaseCFter6_RS04930Not AvailableNegative1136479 - 113776244909.8

Displaying genes 1011 – 1020 of 5061 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.