Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717 is a notable actinobacterium primarily isolated from heavy metal-contaminated soil within a mangrove environment. This strain is characterized by the presence of true flagella, which may contribute to its motility in its natural habitat, allowing it to navigate through complex soil matrices. The genomic structure of this strain is defined by the presence of two replicons, indicating a possibly complex genetic organization that could facilitate diverse metabolic capabilities. The strain is cataloged under the accessions NZ_CP013219.1 and NZ_CP013220.1, which provide reference points for further genomic analysis and comparisons with related species. The ecological significance of S. hygroscopicus subsp. limoneus strain KCTC 1717 lies in its adaptation to heavy metal-contaminated environments, such as mangroves. These environments often harbor unique microbial communities capable of bioremediation, where microorganisms play a critical role in detoxifying pollutants. Thus, this strain may possess specific metabolic pathways that enable it to tolerate or transform heavy metals, contributing to soil health and ecosystem balance in polluted areas. Understanding the capabilities of this strain could provide insights into its potential applications in bioremediation strategies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces hygroscopicus
Strainsubsp. limoneus strain KCTC 1717

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatheavy metal-contaminated soil; mangrove environment
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717

Gene Summary

Adenine Count

271575 bp

Thymine Count

268858 bp

Guanine Count

675613 bp

Cytosine Count

673860 bp

Genome Length

1889906 bp

Protein-coding Genes

1668 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanyl-d-alanine carboxypeptidase family proteinSHL15_RS28540Not AvailableNegative6523807 - 652476333222.7
hypothetical proteinSHL15_RS28545Not AvailablePositive6524925 - 652586634443.3
3' terminal rna ribose 2'-o-methyltransferase hen1SHL15_RS28550Not AvailablePositive6525939 - 652740553263.2
polynucleotide kinase-phosphataseSHL15_RS28555Not AvailablePositive6527402 - 652996994054.8
ripp maturation radical sam c-methyltransferaseSHL15_RS28560Not AvailablePositive6530210 - 653205767996.9
duf5825 family proteinSHL15_RS28565Not AvailablePositive6532054 - 653260219562.7
hypothetical proteinSHL15_RS28570Not AvailablePositive6532757 - 653337121218.0
hypothetical proteinSHL15_RS28575Not AvailablePositive6533393 - 653495556889.8
tir domain-containing proteinSHL15_RS28580Not AvailablePositive6534952 - 653569227069.9
macro domain-containing proteinSHL15_RS28585Not AvailableNegative6535760 - 653667432988.0

Displaying genes 7541 – 7550 of 9447 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.