Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717 is a notable actinobacterium primarily isolated from heavy metal-contaminated soil within a mangrove environment. This strain is characterized by the presence of true flagella, which may contribute to its motility in its natural habitat, allowing it to navigate through complex soil matrices. The genomic structure of this strain is defined by the presence of two replicons, indicating a possibly complex genetic organization that could facilitate diverse metabolic capabilities. The strain is cataloged under the accessions NZ_CP013219.1 and NZ_CP013220.1, which provide reference points for further genomic analysis and comparisons with related species. The ecological significance of S. hygroscopicus subsp. limoneus strain KCTC 1717 lies in its adaptation to heavy metal-contaminated environments, such as mangroves. These environments often harbor unique microbial communities capable of bioremediation, where microorganisms play a critical role in detoxifying pollutants. Thus, this strain may possess specific metabolic pathways that enable it to tolerate or transform heavy metals, contributing to soil health and ecosystem balance in polluted areas. Understanding the capabilities of this strain could provide insights into its potential applications in bioremediation strategies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces hygroscopicus
Strainsubsp. limoneus strain KCTC 1717

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatheavy metal-contaminated soil; mangrove environment
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717

Gene Summary

Adenine Count

271575 bp

Thymine Count

268858 bp

Guanine Count

675613 bp

Cytosine Count

673860 bp

Genome Length

1889906 bp

Protein-coding Genes

1668 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional succinyldiaminopimelate transaminase/glutamate-prephenate aminotransferaseSHL15_RS24150Not AvailablePositive5491549 - 549264639570.9
hypothetical proteinSHL15_RS24155Not AvailableNegative5492734 - 549319813832.5
heavy metal transporterSHL15_RS24160Not AvailableNegative5493485 - 549450135017.9
succinyl-diaminopimelate desuccinylaseSHL15_RS24165Not AvailablePositive5494607 - 549568638131.9
tigr00730 family rossman fold proteinSHL15_RS24170Not AvailablePositive5495802 - 549656027366.8
dihydropteroate synthaseSHL15_RS24175Not AvailableNegative5496792 - 549765230741.7
diviva domain-containing proteinSHL15_RS24180Not AvailablePositive5497791 - 549815612749.2
dna-3-methyladenine glycosylase iSHL15_RS24185Not AvailablePositive5498153 - 549874021166.2
enoyl-coa hydratase-related proteinSHL15_RS24190Not AvailableNegative5498742 - 549954527721.1
duf3117 domain-containing proteinSHL15_RS46925Not AvailablePositive5499918 - 55000855758.15

Displaying genes 6641 – 6650 of 9447 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.