Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717 is a notable actinobacterium primarily isolated from heavy metal-contaminated soil within a mangrove environment. This strain is characterized by the presence of true flagella, which may contribute to its motility in its natural habitat, allowing it to navigate through complex soil matrices. The genomic structure of this strain is defined by the presence of two replicons, indicating a possibly complex genetic organization that could facilitate diverse metabolic capabilities. The strain is cataloged under the accessions NZ_CP013219.1 and NZ_CP013220.1, which provide reference points for further genomic analysis and comparisons with related species. The ecological significance of S. hygroscopicus subsp. limoneus strain KCTC 1717 lies in its adaptation to heavy metal-contaminated environments, such as mangroves. These environments often harbor unique microbial communities capable of bioremediation, where microorganisms play a critical role in detoxifying pollutants. Thus, this strain may possess specific metabolic pathways that enable it to tolerate or transform heavy metals, contributing to soil health and ecosystem balance in polluted areas. Understanding the capabilities of this strain could provide insights into its potential applications in bioremediation strategies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces hygroscopicus
Strainsubsp. limoneus strain KCTC 1717

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatheavy metal-contaminated soil; mangrove environment
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717

Gene Summary

Adenine Count

271575 bp

Thymine Count

268858 bp

Guanine Count

675613 bp

Cytosine Count

673860 bp

Genome Length

1889906 bp

Protein-coding Genes

1668 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i restriction-modification system subunit m/sSHL15_RS23765Not AvailableNegative5393872 - 539549758351.0
duf5131 family proteinSHL15_RS46900Not AvailablePositive5395881 - 539625713942.4
type ii toxin-antitoxin system rele/pare family toxinSHL15_RS23775Not AvailableNegative5396317 - 539658010046.1
type ii toxin-antitoxin system phd/yefm family antitoxinSHL15_RS23780Not AvailableNegative5396573 - 539684210245.3
gnat family n-acetyltransferaseSHL15_RS23785Not AvailableNegative5397088 - 539755216368.4
is110 family transposaseSHL15_RS23790Not AvailableNegative5397699 - 539891643540.7
dna polymerase iii subunit betaSHL15_RS23795Not AvailableNegative5399303 - 540043340024.2
ybak/ebsc family proteinSHL15_RS23800Not AvailableNegative5400517 - 540102017971.7
dimethylargininaseSHL15_RS23805Not AvailableNegative5401053 - 540183228920.4
mfs transporterSHL15_RS23810Not AvailableNegative5402130 - 540354248429.7

Displaying genes 6561 – 6570 of 9447 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.