Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717 is a notable actinobacterium primarily isolated from heavy metal-contaminated soil within a mangrove environment. This strain is characterized by the presence of true flagella, which may contribute to its motility in its natural habitat, allowing it to navigate through complex soil matrices. The genomic structure of this strain is defined by the presence of two replicons, indicating a possibly complex genetic organization that could facilitate diverse metabolic capabilities. The strain is cataloged under the accessions NZ_CP013219.1 and NZ_CP013220.1, which provide reference points for further genomic analysis and comparisons with related species. The ecological significance of S. hygroscopicus subsp. limoneus strain KCTC 1717 lies in its adaptation to heavy metal-contaminated environments, such as mangroves. These environments often harbor unique microbial communities capable of bioremediation, where microorganisms play a critical role in detoxifying pollutants. Thus, this strain may possess specific metabolic pathways that enable it to tolerate or transform heavy metals, contributing to soil health and ecosystem balance in polluted areas. Understanding the capabilities of this strain could provide insights into its potential applications in bioremediation strategies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces hygroscopicus
Strainsubsp. limoneus strain KCTC 1717

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatheavy metal-contaminated soil; mangrove environment
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717

Gene Summary

Adenine Count

271575 bp

Thymine Count

268858 bp

Guanine Count

675613 bp

Cytosine Count

673860 bp

Genome Length

1889906 bp

Protein-coding Genes

1668 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exodeoxyribonuclease iiiSHL15_RS15920Not AvailableNegative3646773 - 364757629584.5
gnat family n-acetyltransferaseSHL15_RS15925Not AvailablePositive3647657 - 364813318007.1
Trna-alaNot AvailableNot AvailablePositive3648264 - 3648337Not Available
gephyrin-like molybdotransferase receptor glprSHL15_RS15935Not AvailableNegative3648429 - 364966444387.8
gnat family n-acetyltransferaseSHL15_RS15940Not AvailableNegative3649842 - 365045023188.0
molybdenum cofactor biosynthesis protein bSHL15_RS15945Not AvailableNegative3650477 - 365098016683.8
cyclic pyranopterin monophosphate synthase moacSHL15_RS15950Not AvailableNegative3650977 - 365148917652.3
gephyrin-like molybdotransferase glpSHL15_RS15955Not AvailableNegative3651574 - 365289645317.9
utp--glucose-1-phosphate uridylyltransferase galuSHL15_RS15960Not AvailableNegative3652893 - 365380433101.5
5-formyltetrahydrofolate cyclo-ligaseSHL15_RS15965Not AvailablePositive3653900 - 365452022143.7

Displaying genes 4951 – 4960 of 9447 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.