Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717 is a notable actinobacterium primarily isolated from heavy metal-contaminated soil within a mangrove environment. This strain is characterized by the presence of true flagella, which may contribute to its motility in its natural habitat, allowing it to navigate through complex soil matrices. The genomic structure of this strain is defined by the presence of two replicons, indicating a possibly complex genetic organization that could facilitate diverse metabolic capabilities. The strain is cataloged under the accessions NZ_CP013219.1 and NZ_CP013220.1, which provide reference points for further genomic analysis and comparisons with related species. The ecological significance of S. hygroscopicus subsp. limoneus strain KCTC 1717 lies in its adaptation to heavy metal-contaminated environments, such as mangroves. These environments often harbor unique microbial communities capable of bioremediation, where microorganisms play a critical role in detoxifying pollutants. Thus, this strain may possess specific metabolic pathways that enable it to tolerate or transform heavy metals, contributing to soil health and ecosystem balance in polluted areas. Understanding the capabilities of this strain could provide insights into its potential applications in bioremediation strategies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces hygroscopicus
Strainsubsp. limoneus strain KCTC 1717

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatheavy metal-contaminated soil; mangrove environment
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces hygroscopicus subsp. limoneus strain KCTC 1717

Gene Summary

Adenine Count

271575 bp

Thymine Count

268858 bp

Guanine Count

675613 bp

Cytosine Count

673860 bp

Genome Length

1889906 bp

Protein-coding Genes

1668 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf397 domain-containing proteinSHL15_RS46460Not AvailablePositive3384199 - 33844027274.55
hypothetical proteinSHL15_RS14830Not AvailablePositive3384436 - 338477111553.9
bifunctional polysaccharide deacetylase/glycosyltransferase family 2 proteinSHL15_RS14835Not AvailableNegative3384776 - 338692679393.2
hypothetical proteinSHL15_RS14840Not AvailableNegative3386949 - 338771624684.3
lysr family transcriptional regulatorSHL15_RS14845Not AvailableNegative3388239 - 338921635492.2
mfs transporterSHL15_RS14850Not AvailablePositive3389340 - 339053340259.3
Tmrna,resume consensus sequence (at 89): aataatcgccaacaccaaNot AvailableNot AvailablePositive3390602 - 3390969Not Available
ssra-binding protein smpbSHL15_RS14855Not AvailableNegative3391092 - 339163420441.3
s41 family peptidaseSHL15_RS14860Not AvailableNegative3391703 - 339289040608.6
permease-like cell division protein ftsxSHL15_RS14865Not AvailableNegative3392959 - 339387633551.4

Displaying genes 4731 – 4740 of 9447 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.