Pseudohongiella spirulinae strain KCTC 32221

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudohongiellaceae

Genus

Pseudohongiella

Description

Pseudohongiella spirulinae strain KCTC 32221 is characterized by a single replicon, which is an important trait for its genomic structure. The strain is cataloged with the accession number NZ_CP013189.1, indicating its availability in genomic databases for further study and analysis. As a member of the Pseudohongiella genus, this strain contributes to the understanding of microbial diversity and ecology, particularly in environments where spirulina, a type of cyanobacteria, is present. The single replicon structure may suggest a streamlined genomic organization, which can be advantageous for survival in specific ecological niches. This trait could potentially influence its adaptability and metabolic capabilities in various environments. Understanding the genomic characteristics of Pseudohongiella spirulinae strain KCTC 32221 could provide insights into its role in microbial communities, especially those associated with aquatic ecosystems. The study of such microorganisms is crucial for exploring their ecological functions, including nutrient cycling and interactions with other species. The strain's specific adaptations may reflect its ecological significance, particularly in habitats where spirulina is a dominant organism. Overall, Pseudohongiella spirulinae strain KCTC 32221 represents an important subject for research into microbial ecology and the evolutionary strategies of microorganisms in specialized environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudohongiellaceae
GenusPseudohongiella
SpeciesPseudohongiella spirulinae
Strainstrain KCTC 32221

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudohongiella spirulinae strain KCTC 32221 chromosome, complete

Gene Summary

Adenine Count

768091 bp

Thymine Count

770510 bp

Guanine Count

903642 bp

Cytosine Count

902876 bp

Genome Length

3345119 bp

Protein-coding Genes

3006 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide biosynthesis tyrosine autokinasePS2015_RS08835Not AvailableNegative1933060 - 193536385082.9
low molecular weight protein-tyrosine-phosphatasePS2015_RS08840Not AvailableNegative1935399 - 193585716730.4
polysaccharide export proteinPS2015_RS08845Not AvailableNegative1935854 - 193705343222.6
transcription/translation regulatory transformer protein rfahPS2015_RS08850Not AvailableNegative1937336 - 193783018902.8
marr family eps-associated transcriptional regulatorPS2015_RS08855Not AvailableNegative1937827 - 193822515361.3
fita-like ribbon-helix-helix domain-containing proteinPS2015_RS08860Not AvailablePositive1938388 - 19386188165.79
type ii toxin-antitoxin system vapc family toxinPS2015_RS08865Not AvailablePositive1938609 - 193902515214.2
hypothetical proteinPS2015_RS08870Not AvailablePositive1939055 - 193965723281.3
duf4160 domain-containing proteinPS2015_RS08875Not AvailablePositive1939733 - 193999910263.6
duf2442 domain-containing proteinPS2015_RS08880Not AvailablePositive1940009 - 19402459087.92

Displaying genes 1831 – 1840 of 3089 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.