Pannonibacter phragmitetus strain 31801

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Pannonibacter

Description

Pannonibacter phragmitetus strain 31801 is characterized by having two replicons, which suggests a complex genetic architecture that may contribute to its adaptability in various environments. The strain is documented in two accession numbers, NZ_CP013069.1 and NZ_CP013068.1, which provide genomic data relevant for further studies. The presence of multiple replicons in Pannonibacter phragmitetus may indicate a potential for horizontal gene transfer, which is often advantageous for bacteria in fluctuating environments. This trait can enhance the organism's ability to acquire new traits, such as antibiotic resistance or metabolic capabilities, which could be significant in ecological contexts where resource availability varies. Understanding the genetic makeup of Pannonibacter phragmitetus strain 31801 through its replicons could provide insights into its ecological roles, particularly in wetland environments where it is typically found. This environment is often characterized by the presence of Phragmites, a genus of plants with which Pannonibacter phragmitetus may have symbiotic or associative relationships. Thus, the genomic features of this strain could be crucial in studying the microbial dynamics in such ecosystems, offering potential implications for bioremediation or the management of wetland health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusPannonibacter
SpeciesPannonibacter phragmitetus
Strainstrain 31801

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete

Gene Summary

Adenine Count

61725 bp

Thymine Count

64925 bp

Guanine Count

114793 bp

Cytosine Count

109562 bp

Genome Length

351005 bp

Protein-coding Genes

306 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2750 domain-containing proteinAPZ00_RS13815Not AvailableNegative2988910 - 298929314112.9
rhs repeat-associated core domain-containing proteinAPZ00_RS13820Not AvailableNegative2989306 - 299044841825.6
hypothetical proteinAPZ00_RS13825Not AvailablePositive2990501 - 29906836209.44
nuca/nucb deoxyribonuclease domain-containing proteinAPZ00_RS13835Not AvailableNegative2991171 - 299182422533.6
type ii secretion system protein gspgAPZ00_RS25920Not AvailablePositive2992007 - 29921535421.15
hypothetical proteinAPZ00_RS13840Not AvailableNegative2992411 - 299297721518.6
nuca/nucb deoxyribonuclease domain-containing proteinAPZ00_RS25925Not AvailableNegative2993050 - 299369723851.5
transcription elongation factor greaAPZ00_RS13850Not AvailableNegative2994234 - 299470717061.2
carbamoyl-phosphate synthase large subunitAPZ00_RS13855Not AvailableNegative2994930 - 2998292120394.0
helix-turn-helix transcriptional regulatorAPZ00_RS13860Not AvailableNegative2998421 - 299871110751.9

Displaying genes 3121 – 3130 of 5206 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.