Pannonibacter phragmitetus strain 31801

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Pannonibacter

Description

Pannonibacter phragmitetus strain 31801 is characterized by having two replicons, which suggests a complex genetic architecture that may contribute to its adaptability in various environments. The strain is documented in two accession numbers, NZ_CP013069.1 and NZ_CP013068.1, which provide genomic data relevant for further studies. The presence of multiple replicons in Pannonibacter phragmitetus may indicate a potential for horizontal gene transfer, which is often advantageous for bacteria in fluctuating environments. This trait can enhance the organism's ability to acquire new traits, such as antibiotic resistance or metabolic capabilities, which could be significant in ecological contexts where resource availability varies. Understanding the genetic makeup of Pannonibacter phragmitetus strain 31801 through its replicons could provide insights into its ecological roles, particularly in wetland environments where it is typically found. This environment is often characterized by the presence of Phragmites, a genus of plants with which Pannonibacter phragmitetus may have symbiotic or associative relationships. Thus, the genomic features of this strain could be crucial in studying the microbial dynamics in such ecosystems, offering potential implications for bioremediation or the management of wetland health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusPannonibacter
SpeciesPannonibacter phragmitetus
Strainstrain 31801

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete

Gene Summary

Adenine Count

61725 bp

Thymine Count

64925 bp

Guanine Count

114793 bp

Cytosine Count

109562 bp

Genome Length

351005 bp

Protein-coding Genes

306 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
accessory factor ubik family proteinAPZ00_RS13510Not AvailablePositive2930493 - 293078310611.6
ybjn domain-containing proteinAPZ00_RS13515Not AvailablePositive2931096 - 293159618877.3
pyrroline-5-carboxylate reductaseAPZ00_RS13520Not AvailablePositive2931593 - 293241427610.4
tetr family transcriptional regulatorAPZ00_RS13525Not AvailablePositive2932517 - 293328427136.7
pp_02696APZ00_RS13530Not AvailablePositive2933375 - 2933731Not Available
atp-binding proteinAPZ00_RS13535Not AvailableNegative2933735 - 293502748533.6
response regulatorAPZ00_RS13540Not AvailableNegative2935173 - 293586825865.2
marr family winged helix-turn-helix transcriptional regulatorAPZ00_RS13545Not AvailableNegative2935873 - 293641820026.9
branched-chain amino acid aminotransferaseAPZ00_RS13550Not AvailablePositive2936735 - 293763433443.1
multidrug effflux mfs transporterAPZ00_RS13555Not AvailableNegative2937720 - 293898244427.5

Displaying genes 3061 – 3070 of 5206 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.