Pannonibacter phragmitetus strain 31801

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Pannonibacter

Description

Pannonibacter phragmitetus strain 31801 is characterized by having two replicons, which suggests a complex genetic architecture that may contribute to its adaptability in various environments. The strain is documented in two accession numbers, NZ_CP013069.1 and NZ_CP013068.1, which provide genomic data relevant for further studies. The presence of multiple replicons in Pannonibacter phragmitetus may indicate a potential for horizontal gene transfer, which is often advantageous for bacteria in fluctuating environments. This trait can enhance the organism's ability to acquire new traits, such as antibiotic resistance or metabolic capabilities, which could be significant in ecological contexts where resource availability varies. Understanding the genetic makeup of Pannonibacter phragmitetus strain 31801 through its replicons could provide insights into its ecological roles, particularly in wetland environments where it is typically found. This environment is often characterized by the presence of Phragmites, a genus of plants with which Pannonibacter phragmitetus may have symbiotic or associative relationships. Thus, the genomic features of this strain could be crucial in studying the microbial dynamics in such ecosystems, offering potential implications for bioremediation or the management of wetland health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusPannonibacter
SpeciesPannonibacter phragmitetus
Strainstrain 31801

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete

Gene Summary

Adenine Count

61725 bp

Thymine Count

64925 bp

Guanine Count

114793 bp

Cytosine Count

109562 bp

Genome Length

351005 bp

Protein-coding Genes

306 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
single-stranded dna-binding proteinAPZ00_RS10645Not AvailablePositive2303255 - 230365615019.6
helix-turn-helix transcriptional regulatorAPZ00_RS10650Not AvailablePositive2303889 - 23041409139.89
dna -binding domain-containing proteinAPZ00_RS25875Not AvailablePositive2304237 - 230451210758.5
transcriptional regulator domain-containing proteinAPZ00_RS27050Not AvailablePositive2304625 - 230493311430.1
duf2285 domain-containing proteinAPZ00_RS10660Not AvailablePositive2304887 - 230539618867.8
alpa family transcriptional regulatorAPZ00_RS10665Not AvailablePositive2305536 - 230581710221.2
replication initiator protein aAPZ00_RS10670Not AvailablePositive2305836 - 230701143824.2
para family partition atpaseAPZ00_RS10675Not AvailablePositive2307008 - 230766123010.0
site-specific dna-methyltransferaseAPZ00_RS10680Not AvailablePositive2307658 - 230840127564.8
hypothetical proteinAPZ00_RS10685Not AvailablePositive2308398 - 23086529242.01

Displaying genes 2481 – 2490 of 5206 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.