Pannonibacter phragmitetus strain 31801

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Pannonibacter

Description

Pannonibacter phragmitetus strain 31801 is characterized by having two replicons, which suggests a complex genetic architecture that may contribute to its adaptability in various environments. The strain is documented in two accession numbers, NZ_CP013069.1 and NZ_CP013068.1, which provide genomic data relevant for further studies. The presence of multiple replicons in Pannonibacter phragmitetus may indicate a potential for horizontal gene transfer, which is often advantageous for bacteria in fluctuating environments. This trait can enhance the organism's ability to acquire new traits, such as antibiotic resistance or metabolic capabilities, which could be significant in ecological contexts where resource availability varies. Understanding the genetic makeup of Pannonibacter phragmitetus strain 31801 through its replicons could provide insights into its ecological roles, particularly in wetland environments where it is typically found. This environment is often characterized by the presence of Phragmites, a genus of plants with which Pannonibacter phragmitetus may have symbiotic or associative relationships. Thus, the genomic features of this strain could be crucial in studying the microbial dynamics in such ecosystems, offering potential implications for bioremediation or the management of wetland health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusPannonibacter
SpeciesPannonibacter phragmitetus
Strainstrain 31801

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete

Gene Summary

Adenine Count

61725 bp

Thymine Count

64925 bp

Guanine Count

114793 bp

Cytosine Count

109562 bp

Genome Length

351005 bp

Protein-coding Genes

306 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinAPZ00_RS25335Not AvailableNegative240818 - 24185836476.5
agmatinaseAPZ00_RS25340Not AvailablePositive242202 - 24325137314.6
abc transporter atp-binding proteinAPZ00_RS25345Not AvailableNegative243958 - 24505538836.2
carbohydrate abc transporter permeaseAPZ00_RS25350Not AvailableNegative245065 - 24611739316.9
carbohydrate abc transporter permeaseAPZ00_RS25355Not AvailableNegative246117 - 24709736231.4
abc transporter substrate-binding proteinAPZ00_RS25360Not AvailableNegative247275 - 24853745299.5
hypothetical proteinAPZ00_RS25365Not AvailableNegative248586 - 25106091730.9
5-dehydro-4-deoxy-d-glucuronate isomeraseAPZ00_RS25370Not AvailableNegative251057 - 25189330482.4
glycoside hydrolase family 105 proteinAPZ00_RS25375Not AvailableNegative251890 - 25299040470.9
laci family dna-binding transcriptional regulatorAPZ00_RS25380Not AvailablePositive253110 - 25416537873.1

Displaying genes 221 – 230 of 5206 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.