Pannonibacter phragmitetus strain 31801

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Pannonibacter

Description

Pannonibacter phragmitetus strain 31801 is characterized by having two replicons, which suggests a complex genetic architecture that may contribute to its adaptability in various environments. The strain is documented in two accession numbers, NZ_CP013069.1 and NZ_CP013068.1, which provide genomic data relevant for further studies. The presence of multiple replicons in Pannonibacter phragmitetus may indicate a potential for horizontal gene transfer, which is often advantageous for bacteria in fluctuating environments. This trait can enhance the organism's ability to acquire new traits, such as antibiotic resistance or metabolic capabilities, which could be significant in ecological contexts where resource availability varies. Understanding the genetic makeup of Pannonibacter phragmitetus strain 31801 through its replicons could provide insights into its ecological roles, particularly in wetland environments where it is typically found. This environment is often characterized by the presence of Phragmites, a genus of plants with which Pannonibacter phragmitetus may have symbiotic or associative relationships. Thus, the genomic features of this strain could be crucial in studying the microbial dynamics in such ecosystems, offering potential implications for bioremediation or the management of wetland health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusPannonibacter
SpeciesPannonibacter phragmitetus
Strainstrain 31801

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pannonibacter phragmitetus strain 31801 plasmid p.p-1, complete

Gene Summary

Adenine Count

61725 bp

Thymine Count

64925 bp

Guanine Count

114793 bp

Cytosine Count

109562 bp

Genome Length

351005 bp

Protein-coding Genes

306 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
metal/formaldehyde-sensitive transcriptional repressorAPZ00_RS08750Not AvailablePositive1882660 - 188293210087.3
cdf family co(ii)/ni(ii) efflux transporter dmefAPZ00_RS08755Not AvailablePositive1882961 - 188392935344.5
iron abc transporter permeaseAPZ00_RS08760Not AvailableNegative1883943 - 188501937047.6
abc transporter substrate-binding proteinAPZ00_RS08765Not AvailableNegative1884997 - 188593834087.9
abc transporter atp-binding proteinAPZ00_RS08770Not AvailableNegative1885949 - 188671627678.4
duf1636 domain-containing proteinAPZ00_RS08775Not AvailableNegative1886713 - 188716515596.6
nad-dependent dihydropyrimidine dehydrogenase subunit preaAPZ00_RS08780Not AvailableNegative1887636 - 188894647549.0
nad(p)-dependent oxidoreductaseAPZ00_RS08785Not AvailableNegative1888975 - 189033347978.2
mfs transporterAPZ00_RS08790Not AvailableNegative1890714 - 189212049689.5
lysr substrate-binding domain-containing proteinAPZ00_RS08795Not AvailablePositive1892170 - 189295529473.1

Displaying genes 2101 – 2110 of 5206 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.