Clostridium perfringens strain JP838

Gram-positiveRodMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium perfringens strain JP838 is a Gram-positive, mesophilic anaerobic bacterium notable for its pathogenic potential in both humans and animals. This organism displays a rod shape and can arrange itself in pairs, singles, or chains. It is motile due to the presence of flagella, and it thrives optimally at 37°C, utilizing organic compounds as a chemoorganotrophic energy source. This strain is associated with a diverse range of hosts, including Homo sapiens, various livestock (e.g., Gallus gallus, Bos, Ovis aries, Sus scrofa), and other animal classes such as Metazoa, Insecta, Aves, Canis lupus familiaris, and Equidae. The pathogenic effects of C. perfringens strain JP838 are significant, contributing to numerous gastrointestinal illnesses and diseases, such as liver abscesses, food poisoning, gangrenous dermatitis, and necrotic enteritis. These health effects can lead to severe outcomes, including sepsis and fatal outbreaks, highlighting the strain's relevance in both clinical and agricultural settings. With four replicons and a single membrane, this organism exhibits a free-living biotic relationship, indicating its ability to thrive independently within host-associated habitats. The prevalence of this strain in various hosts underscores its ecological versatility and the potential for cross-species transmission of pathogenic effects. Understanding the characteristics of C. perfringens strain JP838 is essential for managing its impact on health and disease in both human and animal populations.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium perfringens
Strainstrain JP838

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridium perfringens strain JP838
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos
Cell arrangementPairs - Singles - Chains
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityAnimal; Human

Genome Summary

Clostridium perfringens strain JP838


Gene Summary

Adenine Count

4328 bp

Thymine Count

6274 bp

Guanine Count

1501 bp

Cytosine Count

2554 bp

Genome Length

14657 bp

Protein-coding Genes

14 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plasmid mobilization proteinJFP838_RS16020Not AvailableNegative988 - 130512629.5
copg family transcriptional regulatorJFP838_RS16025Not AvailableNegative1563 - 186811995.9
hypothetical proteinJFP838_RS16030Not AvailableNegative2169 - 341649602.8
hypothetical proteinJFP838_RS16035Not AvailableNegative3506 - 402120452.8
hlyd family efflux transporter periplasmic adaptor subunitJFP838_RS16040Not AvailableNegative4040 - 556958440.3
peptidase domain-containing abc transporterJFP838_RS16045Not AvailableNegative5559 - 776383257.3
hypothetical proteinJFP838_RS16050Not AvailablePositive7939 - 81276450.9
hypothetical proteinJFP838_RS19635Not AvailablePositive8169 - 83455911.19
helix-turn-helix domain-containing proteinJFP838_RS16060Not AvailableNegative8656 - 894611036.3
hypothetical proteinJFP838_RS16065Not AvailablePositive9229 - 94296344.72

Displaying genes 1 – 10 of 641 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

6 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001481plastoquinol-9C53H82O2Chemical structure of plastoquinol-9Not available
Average751.237Da
Monoisotopic750.6314819Da
BASm00056516-geranylgeranyl-2-methylbenzene-1,4-diolC27H40O2Chemical structure of 6-geranylgeranyl-2-methylbenzene-1,4-diolNot available
Average396.615Da
Monoisotopic396.302830528Da
BASm00056526-geranylgeranyl-2,3-dimethylbenzene-1,4-diolC28H42O2Chemical structure of 6-geranylgeranyl-2,3-dimethylbenzene-1,4-diolNot available
Average410.642Da
Monoisotopic410.3184806Da
BASm0014042Oxoglutaric acidC5H6O5Chemical structure of Oxoglutaric acid328-50-7
Average146.0981Da
Monoisotopic146.021523302Da
BASm00141964-Hydroxyphenylpyruvic acidC9H8O4Chemical structure of 4-Hydroxyphenylpyruvic acidNULL
Average180.1574Da
Monoisotopic180.042258744Da
BASm00200002-trans,6-trans,10-trans-Geranylgeranyl diphosphateC20H36O7P2Chemical structure of 2-trans,6-trans,10-trans-Geranylgeranyl diphosphate6699-20-3
Average450.4432Da
Monoisotopic450.19362653Da

Displaying 1–6 of 6 metabolites

Health Effects

Health ConditionRelationReference
Food poisoningCausesPMC5932972
EnterotoxaemiaCausesPMC5932972
Gangrenous dermatitisCausesPMC5932972
Necrotic enteritisCausesPMC5932972
Acute necrotic enteritisCausesPMC13236465
DiarrheaCausesPMC13236465
Liver abscessCausesPMC4394104
Necrotic enteritisCausesPMC5457660
Mild diarrheaCausesPMC5457660
Clostridial myonecrosisCausesPMC5457660

Displaying health effects 1 – 10 of 55 in total