Escherichia coli strain 2009C-3133

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 2009C-3133 is a Gram-negative, rod-shaped bacterium that typically exists in pairs or as single cells. This strain thrives optimally at a temperature of 37.0°C, which corresponds to the physiological temperature of many host organisms, indicating its adaptation to a host-associated habitat. As a facultative anaerobe, E. coli strain 2009C-3133 can grow in both the presence and absence of oxygen, allowing it to inhabit various environments within a host where oxygen levels may fluctuate. The ability of this strain to survive and proliferate in diverse conditions highlights its ecological versatility and potential interactions within the host's microbiome. These traits suggest that E. coli strain 2009C-3133 may play a role in the complex relationships between gut microbiota and host health, further underscoring the significance of understanding such strains in the broader context of microbial ecology and host-associated microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 2009C-3133

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 2009C-3133
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 2009C-3133


Gene Summary

Adenine Count

14980 bp

Thymine Count

15576 bp

Guanine Count

15585 bp

Cytosine Count

17659 bp

Genome Length

63800 bp

Protein-coding Genes

85 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type ii toxin-antitoxin system rele/pare family toxinMJ49_RS26535Not Available-301 - 5077461.47
type ii toxin-antitoxin system rele/pare family toxinMJ49_RS30065Not Available+507 - 161342053.5
type ii toxin-antitoxin system rele/pare family toxinMJ49_RS26550Not Available-1781 - 223016991.7
hypothetical proteinMJ49_RS32635Not Available-2328 - 24684886.95
incfii family plasmid replication initiator repaMJ49_RS26555Not Available-3170 - 402732676.5
repa leader peptide tapMJ49_RS26560Not Available-4020 - 40942699.38
replication regulatory protein repaMJ49_RS26565Not Available-4320 - 458010038.3
duf2726 domain-containing proteinMJ49_RS26570Not Available-4820 - 541022976.4
hemolysin expression modulator hhaMJ49_RS26575Not Available-5448 - 56578253.88
thermonuclease family proteinMJ49_RS26580Not Available-5703 - 616417854.7

Displaying genes 1 – 10 of 5389 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites