Bacteroides vulgatus strain mpk

Gram-positiveRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Bacteroides vulgatus strain mpk is a Gram-positive, rod-shaped bacterium that thrives in anaerobic environments, indicating its adaptation to niches where oxygen is absent. This strain is classified as mesophilic, suggesting it grows optimally at moderate temperatures. Its cellular arrangement consists of singles, and it possesses flagella, although it is noted to have no mobility. As a free-living organism, Bacteroides vulgatus strain mpk is typically associated with the human host, Homo sapiens. This relationship highlights its role in the human microbiome, where it may contribute to various metabolic processes. The organism has a single replicon and features two membranes, typical of Gram-positive bacteria. The presence of Bacteroides vulgatus strain mpk in the human gut microbiota is notable for its potential impact on human health. Bacteroides species are known for their ability to break down complex carbohydrates, which can influence nutrient availability and overall gut health. The ecological role of this strain may extend to interactions with other gut microbiota, influencing community dynamics and metabolic functions. In summary, Bacteroides vulgatus strain mpk exemplifies the complexity of microbial life within human hosts, demonstrating the intricate relationships that exist in the gut ecosystem and the importance of such bacteria in maintaining host health. Its identification and characterization enhance our understanding of the microbial diversity present in the human body.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola vulgatus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides vulgatus strain mpk
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides vulgatus strain mpk


Gene Summary

Adenine Count

1514658 bp

Thymine Count

1468421 bp

Guanine Count

1056250 bp

Cytosine Count

1125562 bp

Genome Length

5165891 bp

Protein-coding Genes

4294 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorBvMPK_RS00005Not AvailableNegative24 - 120343559.7
helix-turn-helix transcriptional regulatorBvMPK_RS00010Not AvailableNegative1216 - 4492117222.0
vape domain-containing proteinBvMPK_RS00015Not AvailableNegative4829 - 594443781.8
helix-turn-helix transcriptional regulatorBvMPK_RS21390Not AvailableNegative6083 - 62887799.48
helix-turn-helix transcriptional regulatorBvMPK_RS00020Not AvailablePositive6290 - 692523614.2
helix-turn-helix transcriptional regulatorBvMPK_RS00025Not AvailablePositive7003 - 870861254.4
hypothetical proteinBvMPK_RS00030Not AvailablePositive8720 - 914216326.9
susc/raga family tonb-linked outer membrane proteinBvMPK_RS00035Not AvailablePositive9330 - 12740124880.0
helix-turn-helix transcriptional regulatorBvMPK_RS00040Not AvailablePositive12768 - 1465471981.0
helix-turn-helix transcriptional regulatorBvMPK_RS00050Not AvailablePositive15117 - 18271113355.0

Displaying genes 1 – 10 of 4398 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

280 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da

Displaying 1–10 of 280 metabolites

Health Effects

No health effects information available for this bacterium.