Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BvMPK_RS04780 | Not Available | Negative | 1172621 - 1173154 | 20260.5 |
| rrna maturation rnase ybey | BvMPK_RS04785 | Not Available | Negative | 1173381 - 1173797 | 15837.9 |
| nucleoside recognition domain-containing protein | BvMPK_RS04790 | Not Available | Negative | 1173842 - 1175074 | 44161.1 |
| hypothetical protein | BvMPK_RS21600 | Not Available | Positive | 1175591 - 1175848 | 9691.39 |
| helix-turn-helix transcriptional regulator | BvMPK_RS04795 | Not Available | Negative | 1175879 - 1176519 | 23851.8 |
| l,d-transpeptidase | BvMPK_RS04800 | Not Available | Negative | 1176678 - 1177697 | 38970.9 |
| site-specific integrase | BvMPK_RS04805 | Not Available | Positive | 1177905 - 1178843 | 36230.7 |
| arac family transcriptional regulator | BvMPK_RS04810 | Not Available | Positive | 1179656 - 1180150 | 19177.3 |
| hypothetical protein | BvMPK_RS04815 | Not Available | Positive | 1180195 - 1183218 | 109980.0 |
| hypothetical protein | BvMPK_RS04820 | Not Available | Positive | 1183302 - 1183781 | 18237.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

