Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | BvMPK_RS04690 | Not Available | Positive | 1151199 - 1151888 | 25264.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21590 | Not Available | Negative | 1152073 - 1152236 | 6664.24 |
| tetratricopeptide repeat protein | BvMPK_RS04695 | Not Available | Positive | 1152455 - 1154110 | 63884.1 |
| hypothetical protein | BvMPK_RS04700 | Not Available | Positive | 1154226 - 1154471 | 9250.33 |
| porin family protein | BvMPK_RS04705 | Not Available | Positive | 1154779 - 1155477 | 25718.4 |
| chloramphenicol acetyltransferase | BvMPK_RS04710 | Not Available | Negative | 1155713 - 1156369 | 25277.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS04715 | Not Available | Negative | 1156370 - 1157184 | 29448.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS04720 | Not Available | Negative | 1157181 - 1158090 | 33050.2 |
| redox-regulated atpase ychf | BvMPK_RS04725 | Not Available | Negative | 1158210 - 1159313 | 40801.9 |
| duf3836 domain-containing protein | BvMPK_RS04730 | Not Available | Negative | 1159515 - 1159901 | 15047.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

