Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS22500 | Not Available | Negative | 1140356 - 1140472 | 4635.71 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21580 | Not Available | Positive | 1140552 - 1140741 | 7055.99 |
| rpn family recombination-promoting nuclease/putative transposase | BvMPK_RS04655 | Not Available | Positive | 1141202 - 1142104 | 34456.8 |
| rpn family recombination-promoting nuclease/putative transposase | BvMPK_RS04660 | Not Available | Positive | 1142332 - 1143180 | 33706.4 |
| flavin reductase family protein | BvMPK_RS04665 | Not Available | Negative | 1143274 - 1143801 | 20314.3 |
| helix-turn-helix transcriptional regulator | BvMPK_RS04670 | Not Available | Positive | 1143946 - 1146530 | 94126.7 |
| family 20 glycosylhydrolase | BvMPK_RS04675 | Not Available | Positive | 1146580 - 1148559 | 75348.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21585 | Not Available | Negative | 1148522 - 1148714 | 7434.41 |
| outer membrane beta-barrel protein | BvMPK_RS04680 | Not Available | Positive | 1148767 - 1149354 | 21953.3 |
| tetratricopeptide repeat protein | BvMPK_RS04685 | Not Available | Positive | 1149397 - 1151064 | 64111.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

