Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | BvMPK_RS04505 | Not Available | Positive | 1108003 - 1108869 | 33332.9 |
| abc transporter permease | BvMPK_RS04510 | Not Available | Positive | 1108872 - 1109741 | 32622.6 |
| duf3098 domain-containing protein | BvMPK_RS04515 | Not Available | Positive | 1109754 - 1109999 | 9145.44 |
| undecaprenyl-diphosphate phosphatase | BvMPK_RS04520 | Not Available | Positive | 1110036 - 1110836 | 28480.0 |
| trna pseudouridine(55) synthase trub | BvMPK_RS04525 | Not Available | Positive | 1110841 - 1111548 | 26653.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | BvMPK_RS04530 | Not Available | Positive | 1111560 - 1112615 | 40193.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | BvMPK_RS04535 | Not Available | Positive | 1112634 - 1113080 | 16503.0 |
| is66 family transposase | BvMPK_RS04540 | Not Available | Negative | 1113272 - 1114837 | 60554.4 |
| is66 family insertion sequence element accessory protein tnpb | BvMPK_RS04545 | Not Available | Negative | 1114924 - 1115274 | 13608.7 |
| hypothetical protein | BvMPK_RS04550 | Not Available | Negative | 1115262 - 1115666 | 14911.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

