Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS04455 | Not Available | Positive | 1093806 - 1095728 | 73144.0 |
| sulfatase | BvMPK_RS04460 | Not Available | Positive | 1095823 - 1097244 | 52981.9 |
| helix-turn-helix transcriptional regulator | BvMPK_RS04465 | Not Available | Positive | 1097355 - 1098880 | 56999.5 |
| abc-f family atp-binding cassette domain-containing protein | BvMPK_RS04470 | Not Available | Positive | 1099137 - 1100729 | 59404.7 |
| xylan 1,4-beta-xylosidase | BvMPK_RS04475 | Not Available | Negative | 1100819 - 1103413 | 96044.1 |
| acetyl-coa hydrolase/transferase family protein | BvMPK_RS04480 | Not Available | Negative | 1103599 - 1105092 | 54010.7 |
| hypothetical protein | BvMPK_RS04485 | Not Available | Negative | 1105130 - 1105480 | 13516.5 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | BvMPK_RS04490 | Not Available | Positive | 1105818 - 1107188 | 51936.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | BvMPK_RS04495 | Not Available | Positive | 1107188 - 1107589 | 15118.3 |
| pspc domain-containing protein | BvMPK_RS04500 | Not Available | Negative | 1107599 - 1107835 | 9155.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

