Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-canonical purine ntp diphosphatase | BvMPK_RS04405 | Not Available | Negative | 1077260 - 1077841 | 21352.7 |
| gnat family n-acetyltransferase | BvMPK_RS04410 | Not Available | Positive | 1078001 - 1078528 | 20715.6 |
| yitt family protein | BvMPK_RS04415 | Not Available | Negative | 1078627 - 1079523 | 33215.4 |
| leucine--trna ligase | BvMPK_RS04420 | Not Available | Negative | 1079605 - 1082439 | 108309.0 |
| s41 family peptidase | BvMPK_RS04425 | Not Available | Negative | 1082738 - 1085962 | 120773.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS04430 | Not Available | Negative | 1086220 - 1087832 | 61913.0 |
| is66 family insertion sequence element accessory protein tnpb | BvMPK_RS04435 | Not Available | Negative | 1087901 - 1088410 | 19798.7 |
| rna polymerase sigma-70 factor | BvMPK_RS04440 | Not Available | Positive | 1088506 - 1089093 | 22777.2 |
| fecr family protein | BvMPK_RS04445 | Not Available | Positive | 1089182 - 1090192 | 38678.5 |
| tonb-dependent receptor | BvMPK_RS04450 | Not Available | Positive | 1090257 - 1093784 | 131477.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

