Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 43 glycosylhydrolase | BvMPK_RS04170 | Not Available | Negative | 1017379 - 1019781 | 90003.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS04175 | Not Available | Negative | 1019818 - 1022539 | 100594.0 |
| duf6055 domain-containing protein | BvMPK_RS04180 | Not Available | Negative | 1022738 - 1024936 | 82116.8 |
| duf4859 domain-containing protein | BvMPK_RS04185 | Not Available | Negative | 1024996 - 1026483 | 54042.2 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS04190 | Not Available | Negative | 1026503 - 1028221 | 64856.1 |
| tonb-dependent receptor | BvMPK_RS04195 | Not Available | Negative | 1028236 - 1031337 | 114379.0 |
| aaa family atpase | BvMPK_RS04200 | Not Available | Positive | 1031526 - 1031825 | 11716.9 |
| pd-(d/e)xk nuclease domain-containing protein | BvMPK_RS04205 | Not Available | Positive | 1031800 - 1032381 | 22481.9 |
| site-specific integrase | BvMPK_RS04210 | Not Available | Positive | 1032808 - 1034043 | 48054.3 |
| hypothetical protein | BvMPK_RS04215 | Not Available | Positive | 1034057 - 1034419 | 13737.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

