Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | BvMPK_RS04075 | Not Available | Positive | 984551 - 985317 | 27867.5 |
| duf2723 domain-containing protein | BvMPK_RS04080 | Not Available | Positive | 985778 - 989182 | 129174.0 |
| polysaccharide deacetylase family protein | BvMPK_RS04085 | Not Available | Positive | 989312 - 989863 | 22012.6 |
| duf4861 domain-containing protein | BvMPK_RS04090 | Not Available | Negative | 989921 - 991093 | 42906.5 |
| gluconate 5-dehydrogenase | BvMPK_RS04095 | Not Available | Negative | 991190 - 991993 | 28590.5 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | BvMPK_RS04100 | Not Available | Negative | 992030 - 992872 | 31850.9 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | BvMPK_RS04105 | Not Available | Negative | 993043 - 994443 | 52348.7 |
| dihydrolipoyl dehydrogenase | BvMPK_RS04110 | Not Available | Negative | 994443 - 995783 | 47553.6 |
| ph domain-containing protein | BvMPK_RS04115 | Not Available | Negative | 995833 - 996243 | 15494.5 |
| orf6n domain-containing protein | BvMPK_RS04120 | Not Available | Negative | 996319 - 996879 | 21509.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

