Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | BvMPK_RS03970 | Not Available | Positive | 956277 - 959363 | 114172.0 |
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS03975 | Not Available | Positive | 959379 - 960929 | 58665.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03980 | Not Available | Negative | 961217 - 962478 | 47213.5 |
| trna dihydrouridine synthase dusb | BvMPK_RS03985 | Not Available | Positive | 962629 - 963618 | 37242.5 |
| head gin domain-containing protein | BvMPK_RS03990 | Not Available | Negative | 963714 - 964565 | 29090.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03995 | Not Available | Negative | 964742 - 965718 | 37940.1 |
| nad(p)-dependent oxidoreductase | BvMPK_RS04000 | Not Available | Negative | 965709 - 966755 | 40058.3 |
| cation diffusion facilitator family transporter | BvMPK_RS04005 | Not Available | Negative | 966766 - 967668 | 32907.3 |
| ribonuclease r | BvMPK_RS04010 | Not Available | Positive | 967799 - 969946 | 81953.4 |
| serine o-acetyltransferase | BvMPK_RS04015 | Not Available | Positive | 970247 - 971155 | 32799.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

