Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pcfj domain-containing protein | BvMPK_RS00350 | Not Available | Positive | 101109 - 102392 | 50110.2 |
| hypothetical protein | BvMPK_RS00355 | Not Available | Positive | 102417 - 102674 | 10245.4 |
| duf3873 family protein | BvMPK_RS00360 | Not Available | Positive | 102695 - 102928 | 8964.74 |
| helix-turn-helix transcriptional regulator | BvMPK_RS21415 | Not Available | Positive | 102925 - 103174 | 9333.19 |
| hypothetical protein | BvMPK_RS00365 | Not Available | Positive | 103228 - 103536 | 11823.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS00370 | Not Available | Positive | 103701 - 104326 | 24035.2 |
| glycoside hydrolase family protein | BvMPK_RS00375 | Not Available | Negative | 104399 - 104926 | 20400.2 |
| duf3872 domain-containing protein | BvMPK_RS00380 | Not Available | Negative | 104923 - 105426 | 19351.1 |
| toprim domain-containing protein | BvMPK_RS00385 | Not Available | Negative | 105423 - 106325 | 33773.5 |
| conjugal transfer protein trao | BvMPK_RS00390 | Not Available | Negative | 106334 - 106909 | 21097.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

