Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | BvMPK_RS03830 | Not Available | Positive | 919463 - 922504 | 112142.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | BvMPK_RS03835 | Not Available | Positive | 922504 - 924207 | 63029.3 |
| rna polymerase sigma-70 factor | BvMPK_RS03840 | Not Available | Positive | 924453 - 924962 | 19967.9 |
| fecr family protein | BvMPK_RS03845 | Not Available | Positive | 925032 - 925835 | 30911.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03850 | Not Available | Positive | 925832 - 928480 | 100943.0 |
| duf4249 domain-containing protein | BvMPK_RS03855 | Not Available | Positive | 928487 - 929452 | 36368.1 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03860 | Not Available | Negative | 929617 - 930641 | 38473.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03865 | Not Available | Positive | 930746 - 931756 | 35974.8 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03870 | Not Available | Positive | 931757 - 932678 | 33619.6 |
| udp-galactopyranose mutase | BvMPK_RS03875 | Not Available | Positive | 932681 - 933787 | 42844.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

