Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | BvMPK_RS03780 | Not Available | Positive | 906809 - 908722 | 73479.2 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03785 | Not Available | Positive | 908824 - 910258 | 54580.1 |
| alpha-l-fucosidase | BvMPK_RS03790 | Not Available | Positive | 910262 - 911647 | 52598.4 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03795 | Not Available | Positive | 911654 - 913728 | 77579.2 |
| sulfatase | BvMPK_RS03800 | Not Available | Positive | 913747 - 915300 | 57840.6 |
| ribonuclease iii | BvMPK_RS03805 | Not Available | Negative | 915445 - 916371 | 35251.2 |
| beta-ketoacyl-acp synthase ii | BvMPK_RS03810 | Not Available | Negative | 916374 - 917639 | 44835.9 |
| acyl carrier protein | BvMPK_RS03815 | Not Available | Negative | 917658 - 917894 | 8382.75 |
| phosphoribosylglycinamide formyltransferase | BvMPK_RS03820 | Not Available | Positive | 918047 - 918625 | 21386.1 |
| rna polymerase sigma-70 factor | BvMPK_RS03825 | Not Available | Negative | 918597 - 919142 | 21413.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

