Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate--coa ligase family protein | BvMPK_RS03730 | Not Available | Positive | 888310 - 889605 | 49554.6 |
| hypothetical protein | BvMPK_RS03735 | Not Available | Positive | 889656 - 890231 | 21488.1 |
| atp-binding protein | BvMPK_RS03740 | Not Available | Negative | 890349 - 892772 | 92953.8 |
| hypothetical protein | BvMPK_RS03745 | Not Available | Positive | 892970 - 893791 | 30723.8 |
| duf3108 domain-containing protein | BvMPK_RS03750 | Not Available | Negative | 893880 - 894689 | 31356.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03755 | Not Available | Negative | 894686 - 896607 | 73444.5 |
| gh3 auxin-responsive promoter family protein | BvMPK_RS03760 | Not Available | Negative | 896612 - 898117 | 57457.0 |
| atp-dependent 6-phosphofructokinase | BvMPK_RS03765 | Not Available | Positive | 898264 - 899274 | 35787.3 |
| hybrid sensor histidine kinase/response regulator transcription factor | BvMPK_RS03770 | Not Available | Negative | 899284 - 903357 | 154737.0 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03775 | Not Available | Positive | 903548 - 906788 | 119038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

