Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | BvMPK_RS03530 | Not Available | Negative | 831554 - 832633 | 40277.9 |
| rhomboid family intramembrane serine protease | BvMPK_RS03535 | Not Available | Negative | 832637 - 833530 | 33974.6 |
| rhomboid family intramembrane serine protease | BvMPK_RS03540 | Not Available | Negative | 833511 - 834188 | 25332.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03545 | Not Available | Positive | 834399 - 834670 | 9560.44 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03550 | Not Available | Positive | 834763 - 838091 | 120251.0 |
| virulence rhum family protein | BvMPK_RS03555 | Not Available | Positive | 838263 - 838733 | 18252.8 |
| trna 2-thiouridine(34) synthase mnma | BvMPK_RS03560 | Not Available | Positive | 838736 - 839791 | 40157.7 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03565 | Not Available | Positive | 839939 - 841500 | 56249.9 |
| alpha-l-arabinofuranosidase c-terminal domain-containing protein | BvMPK_RS03570 | Not Available | Negative | 842301 - 844280 | 75354.2 |
| arabinan endo-1,5-alpha-l-arabinosidase | BvMPK_RS03575 | Not Available | Negative | 844304 - 845839 | 57779.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

