Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1514658 bp
Thymine Count
1468421 bp
Guanine Count
1056250 bp
Cytosine Count
1125562 bp
Genome Length
5165891 bp
Protein-coding Genes
4294 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omph family outer membrane protein | BvMPK_RS03275 | Not Available | Positive | 767211 - 767726 | 18967.6 |
| omph family outer membrane protein | BvMPK_RS03280 | Not Available | Positive | 767784 - 768287 | 19260.2 |
| glutamate racemase | BvMPK_RS03285 | Not Available | Positive | 768390 - 769235 | 31392.0 |
| pyridoxamine kinase | BvMPK_RS03290 | Not Available | Positive | 769292 - 770164 | 32647.3 |
| ftsx-like permease family protein | BvMPK_RS03295 | Not Available | Negative | 770551 - 771789 | 45679.9 |
| 30s ribosome-binding factor rbfa | BvMPK_RS03300 | Not Available | Negative | 771799 - 772134 | 12972.9 |
| o-methyltransferase | BvMPK_RS03305 | Not Available | Negative | 772208 - 772846 | 24383.5 |
| helix-turn-helix transcriptional regulator | BvMPK_RS03310 | Not Available | Negative | 772862 - 774291 | 53998.2 |
| type ii 3-dehydroquinate dehydratase | BvMPK_RS03315 | Not Available | Negative | 774356 - 774778 | 15686.0 |
| site-specific tyrosine recombinase xerd | BvMPK_RS03320 | Not Available | Positive | 774820 - 775794 | 37317.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

